CDS

Accession Number TCMCG057C12178
gbkey CDS
Protein Id XP_018476428.1
Location join(16367632..16368768,16368850..16368989,16369062..16369167,16369275..16369367,16369447..16369536,16369635..16369748,16369864..16369971,16370081..16370154,16370271..16370325,16370426..16370607,16370757..16370886,16370975..16371077,16371224..16371321,16371431..16371577)
Gene LOC108847628
GeneID 108847628
Organism Raphanus sativus

Protein

Length 858aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA344915
db_source XM_018620926.1
Definition PREDICTED: protein VACUOLELESS1 [Raphanus sativus]

EGGNOG-MAPPER Annotation

COG_category U
Description Vps16, C-terminal region
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko04131        [VIEW IN KEGG]
KEGG_ko ko:K20180        [VIEW IN KEGG]
EC -
KEGG_Pathway ko04138        [VIEW IN KEGG]
map04138        [VIEW IN KEGG]
GOs GO:0000323        [VIEW IN EMBL-EBI]
GO:0000325        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003779        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005515        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005764        [VIEW IN EMBL-EBI]
GO:0005765        [VIEW IN EMBL-EBI]
GO:0005768        [VIEW IN EMBL-EBI]
GO:0005773        [VIEW IN EMBL-EBI]
GO:0005774        [VIEW IN EMBL-EBI]
GO:0005856        [VIEW IN EMBL-EBI]
GO:0006810        [VIEW IN EMBL-EBI]
GO:0006906        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0007033        [VIEW IN EMBL-EBI]
GO:0008092        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0009705        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0012505        [VIEW IN EMBL-EBI]
GO:0015629        [VIEW IN EMBL-EBI]
GO:0016020        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016050        [VIEW IN EMBL-EBI]
GO:0016192        [VIEW IN EMBL-EBI]
GO:0016197        [VIEW IN EMBL-EBI]
GO:0030897        [VIEW IN EMBL-EBI]
GO:0031090        [VIEW IN EMBL-EBI]
GO:0031338        [VIEW IN EMBL-EBI]
GO:0031410        [VIEW IN EMBL-EBI]
GO:0031982        [VIEW IN EMBL-EBI]
GO:0032879        [VIEW IN EMBL-EBI]
GO:0032889        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0033043        [VIEW IN EMBL-EBI]
GO:0033263        [VIEW IN EMBL-EBI]
GO:0035542        [VIEW IN EMBL-EBI]
GO:0042144        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043254        [VIEW IN EMBL-EBI]
GO:0044087        [VIEW IN EMBL-EBI]
GO:0044088        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044425        [VIEW IN EMBL-EBI]
GO:0044433        [VIEW IN EMBL-EBI]
GO:0044437        [VIEW IN EMBL-EBI]
GO:0044440        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045992        [VIEW IN EMBL-EBI]
GO:0045995        [VIEW IN EMBL-EBI]
GO:0046907        [VIEW IN EMBL-EBI]
GO:0048284        [VIEW IN EMBL-EBI]
GO:0048519        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050793        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0051049        [VIEW IN EMBL-EBI]
GO:0051093        [VIEW IN EMBL-EBI]
GO:0051128        [VIEW IN EMBL-EBI]
GO:0051179        [VIEW IN EMBL-EBI]
GO:0051234        [VIEW IN EMBL-EBI]
GO:0051239        [VIEW IN EMBL-EBI]
GO:0051241        [VIEW IN EMBL-EBI]
GO:0051469        [VIEW IN EMBL-EBI]
GO:0051641        [VIEW IN EMBL-EBI]
GO:0051649        [VIEW IN EMBL-EBI]
GO:0060627        [VIEW IN EMBL-EBI]
GO:0061024        [VIEW IN EMBL-EBI]
GO:0061025        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0090174        [VIEW IN EMBL-EBI]
GO:0097576        [VIEW IN EMBL-EBI]
GO:0097708        [VIEW IN EMBL-EBI]
GO:0098588        [VIEW IN EMBL-EBI]
GO:0098796        [VIEW IN EMBL-EBI]
GO:0098805        [VIEW IN EMBL-EBI]
GO:0098852        [VIEW IN EMBL-EBI]
GO:0099023        [VIEW IN EMBL-EBI]
GO:2000026        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGCGAACGTCTCTGTTGCTGCGGAGTGGCAGCTTCTCTACAACCGATATTACAGGAAGCCTGAGATCTACCAGATGAGATGGAAACATGTAGATTTGAGTCGCAACAAGGTGGCCTGCGCCTCCTTCGGTGGTCCCATCGCAGTCATTAGAGACGACTCCAAGATCGTCCAGCTCTACGCCGAGTCTGCTCTAAGAAAGCTCCGCATCTTCAACTCAGCAGGTGTGCTCCTCTCCGAGACCGTCTGGAAGCACCCCGGTGGACGCCTCATCGGGATGTCATGGTCAGATGATCAGACATTAATCTCTATTGTCCAAGACGGCACTATCTATCGTTACAACATCCACGCCGAGCTTATTCAGCCTAATGTGACAATGGGGAAAGAGTGCTTTGAGCAGAACGTGGTGGAGTGTGTCTTCTGGGGGAACGGTGTGGTCTGCTTGACGGAAGGAGGGCAGTTGTTTTGTATCTCGGATTTCAAGACGATGAAGCCTTATAAGCTTGCTGATGTCCCCGGGTTGACGGAAGACGATATGCTTCAGCCGAGTTGCTTGGCTGTGAGGGAGCCTCAGTATACTATGTCTGGGAACGTTGAGGTGTTGGTAGCTGTTGGTGATGAGATTTATGTTGTGGATGAGGACGAGGCGCAGAGTATTAGGTTCGATGAGCCTGGTGGCGAAGACTCTGAGATGGGGAATGATGATTATGGTGGGAGTTTGATTGGTCCGGTGCAGAAGATGATTGTGTCACCTAATGGAAAGTTCCTGACACTCTTCACTCATGATGGTCGGATTGTTGTCGTTGGGATGGAATCAAAACAGATTGCTATTGACTACAGCTGTGAGTCAGCGCTTCCTCCTCAGCAAATGGCGTGGTGTGGAATGGACAGTGTGCTGCTCTATTGGGATGAGGATTTGATGATGGTGGGTCCTTTGGGAGATCCAGTACACTATTTCTATGATGAGCCTGTGATTCTCATCCCAGAATGCGATGGAGTGAGGATATTATCTAACACTAGTCTTGAGTTTCTGCAAAGAGTGCCTGACTCTACTGAGTCGATCTTTAAGATAGGAAGCACATCACCTGCGGCTTTGTTGTACGATGCTTTAGATCATTTTGACAGGCGAAGTGCTAAGGCAGATGAAAATTTGAGACTGATTCGTTCATCACTGTCTGAGGCTGTTGAATCCTGTATTGATGCTGCTGGTCATGAATTTGATGTAACTCGTCAGAGGGCTCTGCTACGAGCCGCAAGTTATGGACAAGCTTTCAGCAGCAATTTTCAGCGTGACCGTGTCCAAGAGACTTGTAGAACTTTAAGGGTTCTGAATGCTGTTCGTGATCCTGATATTGGCATACCTCTTAGCATTCAACAGTACAAGTTACTGACACCAGTGGTTTTGATTAGTCGCCTGATTAATGCTCATTCCCACCTTCTTGCTCTCCGGATATCTGAGTACTTAGGAATGAATAAAGAAGTGGTGATAATGCATTGGGCGTGTGCAAAGATAACTGCTTCACCATCAACTCCAGATACTCATCTTCTTGAAATTTTACTTGATAAGCTCCAACTATGCAGAGGAATATCTTATGCTGCAGTGGCCACTCATGCTGATAACTGTGGACGTCGAAAGTTAGCTGCAATGCTAGTTGAACATGAACCACGCTCCACGAAACAGGTTCCTCTTTTACTAAGCATTGGTGAGGAAGATACCGCTTTAGTGAAAGCAACTGAGAGTGGTGACACCGACCTGGTTTATCTTGTTATATTTCATATATGGCAAAAGAGGCCTCCTTTGGAGTTCTTTGCAATGATCCAAGGCAGAGTTTTGGCACGTGATTTATTTGTAGCTTACGCACGGTGTCATAAACAGGAATTTCTGAAGGATTTCTTTTTATCTACGGGTCAGATTCATGAGGTAGCTTTCCTTTTATGGAAAGAATCATGGGATATGGGGAAAAATCCAATGGCTAGCAAAGGATCTCCGCTGCACGGTCCACGCATAAAGCTAATAGAGAAAGCCAGCAACCTTTTCTCTCAGACGAAGGAACACACTTTCGAGTCTAAGGCTGCCGAGGAGCATGCAAAACTCCTGAGGATACAACATGAGCTAGAAGCTAGTACGAAGCAGGCTATCTTTGTTGATTCAAGCATCAATGATACTATACGTACATGTATTGTCCTGCGTAATAATCGCGCTGCAGCAAAAGTGAAGTCCGAATTCAAGGTTTCTGATAAAAGATGGTATTGGCTAAAAACATTTGCTCTGGCTACAATCAAAGACTGGGAAGCTCTCGAGAAGTTTTCAAAAGAAAGGAGACCACCAACAGGGTTCCGTCCATTTGTGGAGGCATGCATTGATGCAGATGAGAAAGCGGAAGCTCTAAAATACATCCCCAAGCTTTCCGATCTTGTGGAAAGAGGCGAGGCTTATGCTCGAATTGGAATGGCCAAGGAAGCTGCTGATGCAGCGGCTCAAGCAAATGATGGAGGAGAGTTGCTGGAGAGATTCAGGAAGACTTTTTCACAGAATGCTATTTTTGATACCCTGAAAATGCCTTTCCAAGGAGCGTAG
Protein:  
MANVSVAAEWQLLYNRYYRKPEIYQMRWKHVDLSRNKVACASFGGPIAVIRDDSKIVQLYAESALRKLRIFNSAGVLLSETVWKHPGGRLIGMSWSDDQTLISIVQDGTIYRYNIHAELIQPNVTMGKECFEQNVVECVFWGNGVVCLTEGGQLFCISDFKTMKPYKLADVPGLTEDDMLQPSCLAVREPQYTMSGNVEVLVAVGDEIYVVDEDEAQSIRFDEPGGEDSEMGNDDYGGSLIGPVQKMIVSPNGKFLTLFTHDGRIVVVGMESKQIAIDYSCESALPPQQMAWCGMDSVLLYWDEDLMMVGPLGDPVHYFYDEPVILIPECDGVRILSNTSLEFLQRVPDSTESIFKIGSTSPAALLYDALDHFDRRSAKADENLRLIRSSLSEAVESCIDAAGHEFDVTRQRALLRAASYGQAFSSNFQRDRVQETCRTLRVLNAVRDPDIGIPLSIQQYKLLTPVVLISRLINAHSHLLALRISEYLGMNKEVVIMHWACAKITASPSTPDTHLLEILLDKLQLCRGISYAAVATHADNCGRRKLAAMLVEHEPRSTKQVPLLLSIGEEDTALVKATESGDTDLVYLVIFHIWQKRPPLEFFAMIQGRVLARDLFVAYARCHKQEFLKDFFLSTGQIHEVAFLLWKESWDMGKNPMASKGSPLHGPRIKLIEKASNLFSQTKEHTFESKAAEEHAKLLRIQHELEASTKQAIFVDSSINDTIRTCIVLRNNRAAAKVKSEFKVSDKRWYWLKTFALATIKDWEALEKFSKERRPPTGFRPFVEACIDADEKAEALKYIPKLSDLVERGEAYARIGMAKEAADAAAQANDGGELLERFRKTFSQNAIFDTLKMPFQGA